Metabolic oscillations in yeast

Main  |  Dynamic data  |  Fluxes  |  Periodic fluxes  |  Metabolites  |  Metabolites in cell  |  Glucose drop  |  Harmonic rhythm  |  Model

Concentration data

Yeast model - PLEASE BE PATIENT; DOWNLOAD MAY TAKE A WHILE

Each metabolite shown only once.
Concentrations scaled to maximal value per metabolite

Gene expression data

Yeast model - PLEASE BE PATIENT; DOWNLOAD MAY TAKE A WHILE

The color scale logarithmic is ranges from minimum (white) to maximum (dark color) per reaction.
Tu et al. data (slow oscillations) are shown in red, Li et al. (2006) data (fast oscillations) shown in blue.

References

  1. C.M. Li and R.R. Klevecz (2006). A rapid genome-scale response of the transcriptional oscillator to perturbation reveals a period-doubling path to phenotypic change. PNAS 103(44):16254.
  2. B.P. Tu, A. Kudlicki, M. Rowicka, and S.L. McKnight (2005) Logic of yeast metabolic cycle: {Temporal} compartmentalization of cellular processes, Science 310,1152.